STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL38920.11-pyrroline-5-carboxylate dehydrogenase. (543 aa)    
Predicted Functional Partners:
EFL38921.1
Proline dehydrogenase.
 0.961
EFL43486.1
Non-ribosomal peptide synthetase/polyketide synthase Ta1; Truncated CDS; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.913
EFL41895.1
Glutamate synthase large subunit.
  
 
 0.908
EFL42639.1
Ornithine-oxo-acid transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.897
EFL37539.1
Condensation domain-containing protein; Unextendable partial coding region.
   
 0.874
EFL37540.1
Condensation domain-containing protein.
   
 0.874
EFL42204.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 
0.873
EFL39508.1
Aldehyde dehydrogenase; Overlaps another CDS with the same product name.
  
  
 
0.871
EFL37819.1
Aminotransferase, class III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.870
EFL39733.1
Aspartate transaminase.
   
  0.868
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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