STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38922.1Transcriptional regulator. (411 aa)    
Predicted Functional Partners:
EFL38921.1
Proline dehydrogenase.
       0.771
EFL38920.1
1-pyrroline-5-carboxylate dehydrogenase.
       0.741
EFL42387.1
Conserved hypothetical protein.
  
     0.518
EFL41247.1
Regulatory protein.
  
     0.496
EFL40205.1
Membrane protein.
  
     0.475
EFL38915.1
Membrane protein.
 
     0.446
EFL40287.1
Conserved hypothetical protein.
  
     0.422
EFL38919.1
Conserved hypothetical protein.
       0.418
EFL41980.1
Integral membrane.
  
     0.404
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.