STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL38923.1Transcriptional regulator. (196 aa)    
Predicted Functional Partners:
EFL38924.1
Drug resistance transporter.
 
     0.644
EFL38925.1
Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.552
EFL37432.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
   0.532
EFL41456.1
Xre family toxin-antitoxin system, antitoxin component.
  
     0.514
EFL39441.1
Xre family toxin-antitoxin system, antitoxin component.
  
     0.482
EFL39708.1
Xre family toxin-antitoxin system, antitoxin component.
  
     0.482
EFL41942.1
Toxin-antitoxin system, toxin component.
  
     0.477
EFL43108.1
Xre family toxin-antitoxin system, antitoxin component.
  
     0.460
EFL38998.1
Regulatory protein KorSA, GntR-family transcriptional regulator.
  
    0.459
EFL40286.1
Xre family toxin-antitoxin system, antitoxin component.
  
     0.440
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.