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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38959.1Conserved hypothetical protein. (316 aa)    
Predicted Functional Partners:
EFL38960.1
YghA protein.
       0.870
EFL39966.1
AP endonuclease, family 2 protein.
  
    0.778
EFL38961.1
Oligopeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.765
EFL38963.1
ABC transporter, permease.
       0.576
EFL38957.1
Aminotransferase, class V.
       0.572
EFL39317.1
Oligopeptide ABC transporter, permease.
       0.572
EFL40302.1
Conserved hypothetical protein.
  
     0.557
EFL38962.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.550
EFL38964.1
Dipeptide transport system permease DppB.
       0.535
EFL38965.1
Oligopeptide/dipeptide ABC transporter, peptide-binding protein.
       0.532
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.