STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38962.1Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (333 aa)    
Predicted Functional Partners:
EFL38963.1
ABC transporter, permease.
 0.992
EFL38964.1
Dipeptide transport system permease DppB.
 
  0.991
EFL39313.1
Peptide ABC transporter, permease.
  0.981
EFL42811.1
Oligopeptide/dipeptide ABC transporter, permease.
  0.966
EFL39314.1
Peptide ABC transporter, permease.
 
  0.962
EFL39319.1
ABC transporter integral membrane protein.
 0.957
EFL43421.1
Opine ABC transporter, permease.
 0.957
EFL38448.1
Peptide ABC transporter, permease.
 0.949
EFL38449.1
Transport permease.
 
  0.938
EFL39317.1
Oligopeptide ABC transporter, permease.
 
 0.938
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.