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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38979.1Conserved hypothetical protein. (722 aa)    
Predicted Functional Partners:
EFL38980.1
Conserved hypothetical protein.
       0.767
EFL38981.1
Conserved hypothetical protein; Belongs to the WXG100 family.
       0.671
EFL41755.1
Transcription regulator.
  
  
 0.654
EFL38982.1
Conserved hypothetical protein.
       0.653
EFL42125.1
Membrane protein; Unextendable partial coding region.
  
  
 0.650
EFL43413.1
Integral membrane protein.
  
  
 0.650
EFL40812.1
Conserved hypothetical protein.
    
  0.488
EFL41696.1
Membrane protein.
    
  0.488
EFL38363.1
SPFH domain/band 7 family domain-containing protein.
     
 0.484
EFL39379.1
SPFH domain/Band 7 family protein.
     
 0.484
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.