STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38994.1GNAT family acetyltransferase. (227 aa)    
Predicted Functional Partners:
EFL38993.1
MerR-family transcriptional regulator.
 
     0.817
EFL38992.1
Calcium-binding protein.
       0.746
EFL38641.1
Sugar kinase.
  
     0.543
EFL41392.1
Integral membrane protein.
  
     0.537
EFL41893.1
Secreted protein.
  
     0.514
EFL40602.1
Integral membrane protein.
  
     0.510
EFL40031.1
PE-PGRS family protein.
  
     0.496
EFL38048.1
ADP-ribosylglycohydrolase superfamily protein.
  
    0.490
EFL41891.1
ADP-ribosylglycohydrolase superfamily protein.
  
     0.486
EFL39674.1
Integral membrane protein.
  
     0.479
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.