Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL38997.1Conserved hypothetical protein. (124 aa)    
Predicted Functional Partners:
EFL39330.1
Regulatory protein.
  
   0.831
EFL41940.1
Conserved hypothetical protein.
 
 
 0.831
EFL38467.1
Conserved hypothetical protein.
  
   0.783
EFL40794.1
Regulatory protein.
  
    0.774
EFL39443.1
Serine phosphatase.
 
   0.773
EFL39038.1
Conserved hypothetical protein.
  
     0.755
EFL41273.1
Conserved hypothetical protein.
  
     0.688
EFL42768.1
Conserved hypothetical protein.
  
     0.681
EFL41093.1
Conserved hypothetical protein.
  
   0.670
EFL38929.1
Sensory box/GGDEF domain/EAL domain-containing protein.
  
 
 0.657
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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