STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38998.1Regulatory protein KorSA, GntR-family transcriptional regulator. (207 aa)    
Predicted Functional Partners:
EFL38999.1
Regulatory protein KorSA, GntR-family transcriptional regulator; Truncated CDS; unextendable partial coding region.
 
    
0.905
EFL38997.1
Conserved hypothetical protein.
       0.538
EFL39441.1
Xre family toxin-antitoxin system, antitoxin component.
  
    0.534
EFL37343.1
AraC family transcriptional regulator.
   
    0.515
EFL40525.1
Sporulation protein.
  
    0.515
EFL40141.1
Xre family toxin-antitoxin system, antitoxin component.
  
     0.512
EFL38275.1
Xre family toxin-antitoxin system, antitoxin component.
  
    0.505
EFL37500.1
Xre family toxin-antitoxin system, antitoxin component.
  
    0.494
EFL40019.1
Xre family toxin-antitoxin system, antitoxin component.
  
    0.490
EFL39453.1
Conserved hypothetical protein.
  
     0.487
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.