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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39023.1Conserved hypothetical protein. (235 aa)    
Predicted Functional Partners:
EFL42114.1
Phosphoserine phosphatase.
    
 0.744
EFL39616.1
GMP synthase.
     
 0.721
EFL39617.1
GMP synthase domain-containing protein.
     
 0.721
EFL39020.1
Extracellular solute-binding domain-containing protein.
       0.526
EFL39021.1
ABC-type sugar transport system, permease component.
       0.526
EFL39022.1
ABC-type sugar transport system, permease component.
       0.526
EFL39480.1
Cystathionine gamma-synthase.
  
 
 0.484
EFL40417.1
Cys/Met metabolism PLP-dependent enzyme.
  
 
 0.484
EFL42595.1
Methionine-gamma lyase.
  
 
 0.484
EFL41150.1
Ham1 family protein; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
    
  0.457
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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