STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39034.1methylmalonyl-CoA mutase, subunit A 1. (566 aa)    
Predicted Functional Partners:
EFL39051.1
LAO/AO transport system ATPase.
 0.999
EFL39603.1
B12-binding protein.
 0.998
EFL39053.1
methylmalonyl-CoA epimerase.
 
  
 0.973
EFL38040.1
methylmalonyl-CoA mutase.
 
0.904
EFL38537.1
Ferredoxin oxidoreductase, alpha subunit.
    
 0.807
EFL39776.1
Ferredoxin oxidoreductase, alpha subunit.
    
 0.807
EFL43162.1
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
    
 0.798
EFL39170.1
Oxoglutarate dehydrogenase (succinyl-transferring), E1 component.
   
 
  0.795
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
     
 0.795
EFL41278.1
Citrate (Si)-synthase; Belongs to the citrate synthase family.
     
 0.795
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.