STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39036.1Conserved hypothetical protein. (155 aa)    
Predicted Functional Partners:
EFL39037.1
Helix-turn-helix domain-containing protein.
 
     0.938
EFL37915.1
Conserved hypothetical protein.
  
     0.625
EFL43218.1
Transposase.
  
     0.609
sti
Subtilase-type protease inhibitor; Strong inhibitor of bacterial serine proteases such as subtilisin.
  
     0.602
EFL37296.1
Transposase.
  
     0.598
EFL39035.1
Membrane protein.
       0.558
EFL39038.1
Conserved hypothetical protein.
 
     0.542
EFL37326.1
Regulatory protein AfsR.
  
     0.538
EFL39040.1
Thymidylate kinase.
 
     0.522
EFL41528.1
Secreted protein.
  
     0.503
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.