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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39038.1Conserved hypothetical protein. (201 aa)    
Predicted Functional Partners:
EFL38274.1
Regulatory protein.
 
   0.811
EFL39330.1
Regulatory protein.
  
   0.807
EFL39039.1
Molybdenum cofactor biosynthesis protein A.
       0.773
EFL39040.1
Thymidylate kinase.
       0.773
EFL39041.1
ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family.
       0.773
EFL43106.1
Conserved hypothetical protein.
  
     0.764
EFL38997.1
Conserved hypothetical protein.
  
     0.755
EFL37580.1
Conserved hypothetical protein.
  
     0.754
EFL40850.1
Conserved hypothetical protein.
  
     0.724
EFL42332.1
Conserved hypothetical protein.
  
     0.713
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.