STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39045.1Conserved hypothetical protein. (210 aa)    
Predicted Functional Partners:
EFL39047.1
Conserved hypothetical protein.
 
     0.971
EFL39046.1
Conserved hypothetical protein.
 
    
0.891
EFL39048.1
Regulatory protein, MarR.
       0.771
EFL39043.1
Conserved hypothetical protein.
       0.750
EFL39044.1
Membrane protein.
       0.750
EFL39042.1
MarR family transcriptional regulator.
       0.706
EFL39035.1
Membrane protein.
       0.552
EFL41564.1
Membrane protein.
  
     0.539
EFL41561.1
ATP/GTP-binding protein.
 
     0.489
EFL41563.1
Conserved hypothetical protein.
 
     0.436
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.