Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL39050.1Asp-rich hydrophilic protein. (213 aa)    
Predicted Functional Partners:
EFL39049.1
DNA-binding response regulator TcrA.
  
  
 0.777
EFL40851.1
Secreted protein.
    
   0.578
EFL37713.1
Integral membrane protein.
   
    0.448
EFL37714.1
Integral membrane transporter with CBS domains.
   
    0.448
EFL37715.1
Membrane protein containing CBS domain.
   
    0.448
EFL37716.1
CBS domain-containing protein.
   
    0.448
EFL41437.1
CBS domain-containing protein.
   
    0.448
EFL42485.1
Integral membrane transporter with CBS domains.
   
    0.448
EFL42486.1
Integral membrane protein.
   
    0.448
EFL42610.1
Membrane protein.
   
    0.448
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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