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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39053.1methylmalonyl-CoA epimerase. (146 aa)    
Predicted Functional Partners:
EFL39603.1
B12-binding protein.
  
 0.998
EFL39496.1
propionyl-CoA carboxylase, beta subunit.
 
 
 0.992
EFL38040.1
methylmalonyl-CoA mutase.
  
 0.983
EFL38911.1
methylmalonyl-CoA decarboxylase, alpha subunit.
 
 
 0.978
EFL39034.1
methylmalonyl-CoA mutase, subunit A 1.
 
  
 0.977
EFL39549.1
methylmalonyl-CoA mutase.
 
  
 0.977
EFL39051.1
LAO/AO transport system ATPase.
 
   
 0.934
hmgA
Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate.
  
 0.909
EFL43271.1
crotonyl-CoA reductase.
    
 0.895
EFL39052.1
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.828
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.