Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL39089.1Conserved hypothetical protein; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (225 aa)    
Predicted Functional Partners:
EFL39090.1
Sua5/YciO/YrdC/YwlC family protein; Belongs to the SUA5 family.
       0.878
EFL40418.1
Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
     
  0.850
prmC
protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
       0.807
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
  
    0.779
EFL38549.1
Glucosyltransferase.
  
 
 0.755
EFL41298.1
Transferase.
  
 
 0.742
rpmE
50S ribosomal protein L31; Binds the 23S rRNA.
       0.707
EFL40349.1
Metallo-beta-lactamase superfamily protein.
   
   0.690
EFL43509.1
Metallo-beta-lactamase superfamily protein.
   
   0.690
EFL39087.1
Undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase.
       0.668
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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