STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39104.1Mutator family transposase; Required for the transposition of the insertion element. (361 aa)    
Predicted Functional Partners:
EFL39126.1
ISChy4, transposition helper protein.
  
     0.666
EFL39125.1
Transposase.
 
     0.643
EFL39115.1
Conserved hypothetical protein; Required for the transposition of the insertion element.
  
     0.558
EFL37268.1
ISMsm1, transposase; Truncated CDS.
 
   
 0.529
EFL37319.1
Transposase.
 
     0.522
EFL39103.1
Integrase; Truncated CDS.
       0.483
EFL37260.1
Transposase.
 
     0.469
EFL39105.1
Transposase.
 
     0.425
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.