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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39155.1Membrane protein. (312 aa)    
Predicted Functional Partners:
EFL43276.1
phenylacetate-CoA oxygenase, PaaH subunit.
  
 0.928
EFL40331.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
 
 0.834
EFL43279.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
  
 0.824
EFL43231.1
ferredoxin-NADP reductase.
 
 
  0.781
EFL39156.1
TetR-family transcriptional regulator.
       0.712
EFL37848.1
Transcriptional regulator.
 
     0.560
EFL39154.1
Conserved hypothetical protein.
 
     0.560
EFL40886.1
Regulatory protein, MerR.
 
     0.531
EFL37849.1
Fatty oxidation complex, alpha subunit.
 
 
 0.483
EFL39029.1
Membrane protein.
  
     0.470
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.