Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL39192.1N-acetylmuramoyl-L-alanine amidase. (197 aa)    
Predicted Functional Partners:
EFL40366.1
Membrane protein.
  
     0.748
EFL41674.1
Conserved hypothetical protein.
  
     0.748
EFL41204.1
M6 family metalloprotease domain-containing protein.
  
     0.730
EFL38239.1
Iron-sulfur protein.
  
     0.723
EFL41564.1
Membrane protein.
  
     0.702
EFL39481.1
Membrane protein.
  
     0.696
EFL40779.1
Conserved hypothetical protein.
 
     0.691
EFL40210.1
Conserved hypothetical protein.
  
     0.687
EFL39194.1
D-cysteine desulfhydrase, PLP-dependent enzyme.
       0.668
EFL42942.1
Integral membrane protein.
 
     0.661
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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