STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39205.1Integral membrane protein. (88 aa)    
Predicted Functional Partners:
EFL39206.1
Solute:sodium symporter (SSS) family transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
   
 0.953
EFL39207.1
Acetyltransferase, GNAT family protein.
 
     0.808
EFL42093.1
Solute:sodium symporter (SSS) family transporter.
 
   
 0.808
EFL39204.1
HTH-type transcriptional repressor DasR.
       0.731
EFL39208.1
Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
       0.679
EFL39209.1
Ribonucleoside-diphosphate reductase, beta subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.
       0.679
EFL37879.1
Phospholipase C, phosphocholine-specific; Unextendable partial coding region.
  
     0.612
EFL38484.1
Sugar hydrolase.
       0.552
EFL38486.1
Sugar transporter integral membrane protein; Overlaps another CDS with the same product name.
       0.552
EFL38485.1
Sugar transporter integral membrane protein; Overlaps another CDS with the same product name.
       0.546
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.