Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL39226.1TetR-family transcriptional regulator. (203 aa)    
Predicted Functional Partners:
EFL39227.1
Histidinol-phosphate phosphatase HisN.
       0.773
EFL39228.1
Signal-transduction protein with CBS domains.
       0.690
EFL39266.1
Conserved hypothetical protein.
  
     0.484
EFL41326.1
Secreted protein.
  
     0.480
EFL37799.1
TetR family transcriptional regulator.
  
     0.479
EFL41323.1
Non-specific serine/threonine protein kinase.
  
     0.457
EFL41257.1
S37 family peptidase.
  
     0.409
EFL38735.1
Cysteine dioxygenase type I superfamily protein.
  
     0.404
EFL41409.1
Integral membrane protein.
  
     0.404
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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