STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39259.16-O-methylguanine DNA methyltransferase, DNA binding domain-containing protein. (185 aa)    
Predicted Functional Partners:
EFL39258.1
Integral membrane protein.
       0.790
EFL39255.1
UvrD/Rep family helicase.
 
     0.700
EFL39257.1
ATP-dependent DNA helicase.
 
   
 0.668
EFL39253.1
NUDIX family hydrolase.
 
     0.653
EFL39254.1
M20/M25/M40 family peptidase.
       0.613
EFL39256.1
ATP-dependent DNA helicase.
 
   
 0.550
EFL41120.1
DNA/RNA helicase, superfamily II.
  
     0.540
EFL39260.1
Proteinase.
       0.470
EFL42537.1
Molybdenum-pterin binding domain-containing protein.
       0.458
EFL42536.1
Molybdate ABC transporter, periplasmic molybdate-binding protein.
       0.422
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.