Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL39263.1Conserved hypothetical protein. (261 aa)    
Predicted Functional Partners:
EFL39265.1
Transferase.
 
     0.834
EFL39262.1
Thiazole biosynthesis adenylyltransferase ThiF.
       0.797
EFL39028.1
Hypothetical hydrophilic protein.
  
     0.754
EFL40210.1
Conserved hypothetical protein.
  
     0.752
EFL40333.1
Conserved hypothetical protein.
  
     0.749
EFL41548.1
Conserved hypothetical protein.
  
 
  0.746
EFL41403.1
Membrane protein.
  
     0.743
EFL38239.1
Iron-sulfur protein.
  
     0.741
EFL42502.1
Membrane protein.
  
     0.733
EFL39945.1
Conserved hypothetical protein.
  
     0.724
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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