Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL39269.1TetR family transcriptional regulator. (214 aa)    
Predicted Functional Partners:
EFL39270.1
ATP-binding protein.
       0.770
EFL39268.1
Conserved hypothetical protein.
       0.734
EFL39271.1
Integral membrane protein.
       0.690
EFL39267.1
Hydrolase.
       0.673
EFL39264.1
Integral membrane protein.
       0.552
EFL39265.1
Transferase.
       0.552
EFL39266.1
Conserved hypothetical protein.
       0.552
EFL40070.1
NUDIX family hydrolase.
  
     0.457
EFL38945.1
Methionine synthase, vitamin-B12 independent.
  
 
   0.443
EFL40068.1
crp/Fnr family transcriptional regulator.
  
     0.443
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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