Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL39292.1O-methyltransferase. (174 aa)    
Predicted Functional Partners:
EFL41520.1
Conserved hypothetical protein.
  
  
 0.681
EFL43486.1
Non-ribosomal peptide synthetase/polyketide synthase Ta1; Truncated CDS; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
 0.597
EFL39291.1
RNA polymerase sigma-70 factor, ECF subfamily.
     
 0.585
EFL37539.1
Condensation domain-containing protein; Unextendable partial coding region.
   
 0.582
EFL37540.1
Condensation domain-containing protein.
   
 0.582
EFL39289.1
Heat shock protein HtrA.
     
 0.554
EFL39287.1
Conserved hypothetical protein.
       0.552
tatB
Sec-independent protein translocase TatB-like protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.
       0.552
EFL39290.1
Membrane protein.
       0.552
EFL38371.1
AP endonuclease, family 2.
   
    0.548
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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