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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39304.1Acetyltransferase. (360 aa)    
Predicted Functional Partners:
argJ
ArgJ family protein; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
  
  
  0.905
EFL39733.1
Aspartate transaminase.
    
  0.893
EFL39305.1
Transcriptional regulatory protein; Truncated CDS.
       0.851
EFL38197.1
Aspartate aminotransferase.
    
  0.802
EFL39302.1
Succinyldiaminopimelate transaminase.
    
  0.802
EFL39426.1
Aminotransferase, classes I and II.
    
  0.802
EFL39303.1
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
       0.778
EFL39968.1
Conserved hypothetical protein.
  
     0.678
EFL40931.1
blasticidin-S acetyltransferase.
  
  
  0.527
EFL40552.1
Valine dehydrogenase (ValDH); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
  
  0.487
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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