STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39311.1Oligopeptide transport ATP-binding protein AppF; Belongs to the ABC transporter superfamily. (349 aa)    
Predicted Functional Partners:
EFL39313.1
Peptide ABC transporter, permease.
 0.993
EFL39315.1
ABC-type oligopeptide transport system.
 
 
 0.988
EFL39314.1
Peptide ABC transporter, permease.
 
 0.986
EFL39312.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 
0.967
EFL38963.1
ABC transporter, permease.
 0.950
EFL38065.1
Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.944
EFL38964.1
Dipeptide transport system permease DppB.
 
 0.943
EFL39317.1
Oligopeptide ABC transporter, permease.
 
 0.942
EFL39319.1
ABC transporter integral membrane protein.
 0.942
EFL43421.1
Opine ABC transporter, permease.
 0.932
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.