Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL39324.1Integral membrane protein. (278 aa)    
Predicted Functional Partners:
EFL39326.1
Ferredoxin, 2Fe-2S.
 
 
 
 0.992
EFL39325.1
FAD flavoprotein oxidase.
 
 
 
 0.981
EFL39323.1
Conserved hypothetical protein; Truncated CDS.
     
 0.818
EFL39563.1
Succinate dehydrogenase, iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
   
 
 0.758
EFL42950.1
Fumarate reductase, iron-sulfur protein.
   
 
 0.758
EFL39322.1
Bacterial extracellular solute-binding protein, family 5.
       0.746
EFL39562.1
Succinate dehydrogenase, flavoprotein subunit.
   
 
 0.673
EFL39989.1
L-aspartate oxidase (LASPO) (Quinolinate synthetase B).
   
 
 0.644
EFL42949.1
Fumarate reductase, flavoprotein subunit.
   
 
 0.644
EFL39321.1
Hypothetical protein.
       0.625
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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