STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39326.1Ferredoxin, 2Fe-2S. (254 aa)    
Predicted Functional Partners:
EFL39325.1
FAD flavoprotein oxidase.
 
 0.999
EFL39560.1
Succinate dehydrogenase, cytochrome b556 subunit.
  
 0.994
EFL39324.1
Integral membrane protein.
 
 
 
 0.992
EFL39561.1
Succinate dehydrogenase, hydrophobic membrane anchor protein.
  
 0.992
EFL39367.1
Fumarate hydratase, class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
 
 0.991
EFL39562.1
Succinate dehydrogenase, flavoprotein subunit.
 
 0.988
EFL37975.1
Formate dehydrogenase, beta subunit.
   
 
 0.987
EFL42949.1
Fumarate reductase, flavoprotein subunit.
  
 0.986
EFL42948.1
Succinate dehydrogenase cytochrome B subunit.
  
 0.985
EFL39170.1
Oxoglutarate dehydrogenase (succinyl-transferring), E1 component.
  
 0.980
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.