STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL39334.1Membrane protein. (404 aa)    
Predicted Functional Partners:
EFL39333.1
GntR-family transcriptional regulator.
       0.750
EFL39783.1
Conserved hypothetical protein.
  
     0.599
EFL39548.1
Integral membrane protein.
  
     0.586
EFL39335.1
Peptidoglycan binding domain-containing protein.
       0.584
EFL41979.1
Conserved hypothetical protein.
  
     0.570
EFL39331.1
MutT/NUDIX family protein; Belongs to the Nudix hydrolase family.
  
    0.553
EFL39332.1
Conserved hypothetical protein.
  
    0.553
EFL39674.1
Integral membrane protein.
  
     0.539
EFL40146.1
Conserved hypothetical protein.
  
     0.532
EFL38248.1
Cellulose-binding protein.
  
     0.513
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.