STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39341.1Anti-sigma B factor RsbT. (148 aa)    
Predicted Functional Partners:
EFL39343.1
sigma-B regulator RsbR.
 
 
 0.979
EFL39342.1
Anti-sigma factor B antagonist.
 
 
 0.975
EFL37644.1
sigma-B regulator RsbR.
 
 
 0.911
EFL37645.1
Anti-sigma factor B antagonist.
 
 
 0.895
EFL38929.1
Sensory box/GGDEF domain/EAL domain-containing protein.
  
 
 0.657
EFL39344.1
Stage II sporulation protein E (SpoIIE).
  
   0.651
EFL39132.1
Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.635
EFL37643.1
Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
 
 0.624
EFL37443.1
PAS/PAC sensor hybrid histidine kinase.
 
 
 0.603
EFL37442.1
PAS/PAC sensor hybrid histidine kinase.
 
 
 0.563
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.