STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39344.1Stage II sporulation protein E (SpoIIE). (386 aa)    
Predicted Functional Partners:
EFL38760.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
  
 
 0.813
EFL43034.1
Membrane protein.
 
  0.795
EFL38759.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
  
 
 0.781
EFL42638.1
Integral membrane sensor protein.
 
  0.777
EFL37620.1
Integral membrane sensor protein.
 
  0.758
EFL37442.1
PAS/PAC sensor hybrid histidine kinase.
  
 0.744
EFL37443.1
PAS/PAC sensor hybrid histidine kinase.
  
 0.744
EFL39345.1
MarR-family transcriptional regulator.
 
    0.739
EFL39340.1
Stage II sporulation protein E (SpoIIE).
 
     0.732
EFL43053.1
Regulatory protein.
  
     0.732
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.