STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Coexpression
Experiments
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[Homology]
Score
EFL39352.1Aminoglycoside phosphotransferase, antibiotic resistance protein. (303 aa)    
Predicted Functional Partners:
EFL39353.1
Peptidase C14, caspase catalytic subunit p20.
       0.878
EFL39354.1
Mucin-2.
       0.826
EFL39351.1
Conserved hypothetical protein.
       0.784
EFL38418.1
UDP-N-acetylglucosamine 1-carboxyvinyltransferase.
    
 0.702
glmU
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.
    
 0.688
EFL39349.1
MutT-family protein; Belongs to the Nudix hydrolase family.
       0.681
murB
UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
     
 0.666
EFL38184.1
Hydroxymethylglutaryl-coenzyme A reductase.
     
  0.597
EFL42524.1
Phosphoglucomutase/phosphomannomutase.
  
 
 0.586
EFL38561.1
Transferase.
  
 
 0.516
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.