STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39354.1Mucin-2. (181 aa)    
Predicted Functional Partners:
EFL37738.1
Conserved hypothetical protein.
   
    0.933
EFL40694.1
Trehalose-phosphate synthase.
  
 
 0.855
EFL39352.1
Aminoglycoside phosphotransferase, antibiotic resistance protein.
       0.826
EFL39353.1
Peptidase C14, caspase catalytic subunit p20.
  
    0.826
EFL39351.1
Conserved hypothetical protein.
       0.750
EFL39349.1
MutT-family protein; Belongs to the Nudix hydrolase family.
       0.665
EFL37481.1
PTS system, IIBC component.
     
 0.659
EFL41711.1
Alpha-amylase.
  
 
 0.654
EFL42805.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
    0.575
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.552
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.