STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39369.1PE-PGRS family protein. (355 aa)    
Predicted Functional Partners:
menG
2-heptaprenyl-1,4-naphthoquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
   
 0.830
EFL38184.1
Hydroxymethylglutaryl-coenzyme A reductase.
    
 
 0.771
EFL39368.1
Cytochrome P450 family protein.
       0.732
EFL41913.1
Thioesterase family domain-containing protein.
    
 0.576
EFL42578.1
Conserved hypothetical protein.
    
 0.576
EFL39571.1
Integral membrane protein; Overlaps another CDS with the same product name; Belongs to the UbiA prenyltransferase family.
     
 0.556
EFL39872.1
4-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family.
     
 0.556
EFL39371.1
Syringomycin synthetase.
       0.547
EFL39367.1
Fumarate hydratase, class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
       0.494
EFL38205.1
Thioesterase.
    
 0.476
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.