STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL39416.1Zinc carboxypeptidase. (446 aa)    
Predicted Functional Partners:
EFL39415.1
Natural resistance-associated macrophage protein.
       0.583
EFL38319.1
Subtilisin inhibitor (SSI type); Belongs to the protease inhibitor I16 (SSI) family.
  
 
  0.572
whiA
Conserved hypothetical protein; Involved in cell division and chromosome segregation.
     
 0.554
EFL41344.1
Serine protease; Belongs to the peptidase S8 family.
  
  
  0.552
EFL41969.1
P-loop ATPase; Displays ATPase and GTPase activities.
       0.552
EFL41970.1
Conserved hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
       0.552
pgk
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
       0.508
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
       0.508
EFL41218.1
Two component system histidine kinase.
  
     0.481
sti
Subtilase-type protease inhibitor; Strong inhibitor of bacterial serine proteases such as subtilisin.
  
 
  0.479
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.