STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39419.1Endoribonuclease L-PSP. (136 aa)    
Predicted Functional Partners:
EFL39420.1
IclR family transcriptional regulator.
 
     0.896
EFL39421.1
2-oxo-3-deoxygluconate kinase.
 
     0.896
EFL39423.1
N-acyl-D-amino acid deacylase.
 
   
 0.803
EFL39422.1
Amino acid aldolase.
 
   
 0.794
EFL39025.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
   
  0.681
EFL38172.1
Anthranilate synthase, phenazine specific.
    
  0.579
EFL38514.1
Anthranilate synthase, phenazine specific; Unextendable partial coding region.
    
  0.579
EFL41800.1
Anthranilate synthase, phenazine specific.
    
  0.579
EFL39418.1
Gluconate transporter.
       0.576
EFL38164.1
Isochorismatase.
     
  0.563
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.