Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL39421.12-oxo-3-deoxygluconate kinase. (369 aa)    
Predicted Functional Partners:
EFL41607.1
KHG/KDPG aldolase.
 
 
 0.960
EFL39420.1
IclR family transcriptional regulator.
 
     0.927
EFL39419.1
Endoribonuclease L-PSP.
 
     0.896
EFL42464.1
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.889
ispD-2
Pyrophosphorylase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  0.860
EFL39422.1
Amino acid aldolase.
 
     0.830
EFL39423.1
N-acyl-D-amino acid deacylase.
 
     0.814
EFL40863.1
PTS system, fructose-specific family, IIABC component.
     
 0.774
EFL42556.1
3-oxoacyl-[acyl-carrier-protein] reductase.
    
  0.754
EFL43145.1
3-oxoacyl-[acyl-carrier protein] reductase.
    
  0.754
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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