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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39421.12-oxo-3-deoxygluconate kinase. (369 aa)    
Predicted Functional Partners:
EFL41607.1
KHG/KDPG aldolase.
 
 
 0.977
EFL42464.1
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.937
EFL39420.1
IclR family transcriptional regulator.
 
     0.923
ispD-2
Pyrophosphorylase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  0.902
EFL39419.1
Endoribonuclease L-PSP.
 
    0.891
EFL42840.1
IolB.
 
 
 0.862
EFL39422.1
Amino acid aldolase.
 
     0.836
EFL39423.1
N-acyl-D-amino acid deacylase.
 
     0.821
EFL40863.1
PTS system, fructose-specific family, IIABC component.
     
 0.767
EFL42556.1
3-oxoacyl-[acyl-carrier-protein] reductase.
 
 
  0.747
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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