STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39422.1Amino acid aldolase. (421 aa)    
Predicted Functional Partners:
EFL39423.1
N-acyl-D-amino acid deacylase.
 
   
 0.977
EFL38244.1
Pyruvate dehydrogenase; Belongs to the TPP enzyme family.
  
    0.837
EFL42905.1
Pyruvate dehydrogenase (cytochrome); Belongs to the TPP enzyme family.
  
    0.837
EFL39421.1
2-oxo-3-deoxygluconate kinase.
 
     0.836
EFL39420.1
IclR family transcriptional regulator.
 
     0.817
EFL39419.1
Endoribonuclease L-PSP.
 
   
 0.801
EFL38972.1
L-serine ammonia-lyase; Belongs to the iron-sulfur dependent L-serine dehydratase family.
   
 
  0.772
EFL38925.1
Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 
  0.689
EFL37670.1
Threonine dehydratase.
    
  0.637
EFL39476.1
Threonine dehydratase.
    
  0.637
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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