STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39451.1FAD-dependent oxidoreductase. (377 aa)    
Predicted Functional Partners:
EFL39454.1
roadblock/LC7 domain-containing protein.
 
     0.718
EFL39452.1
ATP/GTP-binding protein.
       0.678
EFL39453.1
Conserved hypothetical protein.
       0.678
EFL43279.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
  
  
 0.676
EFL43486.1
Non-ribosomal peptide synthetase/polyketide synthase Ta1; Truncated CDS; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
 0.672
EFL37403.1
Cytochrome P450 family protein.
  
  0.663
EFL40331.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
  
  
 0.657
EFL43177.1
LysR family regulatory protein; Belongs to the LysR transcriptional regulatory family.
 
     0.649
EFL38161.1
Monooxygenase, FAD-binding.
  
     0.634
EFL38366.1
Rieske family iron-sulfur cluster-binding protein.
   
 
 0.598
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.