STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39459.1Conserved hypothetical protein. (108 aa)    
Predicted Functional Partners:
EFL39464.1
dTMP kinase.
 
     0.787
EFL38549.1
Glucosyltransferase.
    
  0.610
EFL41298.1
Transferase.
    
  0.610
EFL41043.1
Translation initiation factor; Belongs to the eIF-2B alpha/beta/delta subunits family.
   
   0.574
EFL37214.1
Conserved hypothetical protein.
    
   0.560
EFL37311.1
Conserved hypothetical protein.
    
   0.560
EFL37465.1
Integral membrane protein.
    
   0.560
EFL37697.1
Proteinase.
    
   0.560
EFL37866.1
Glycosyl hydrolase.
    
   0.560
EFL38319.1
Subtilisin inhibitor (SSI type); Belongs to the protease inhibitor I16 (SSI) family.
    
   0.560
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.