STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL39460.1Conserved hypothetical protein. (188 aa)    
Predicted Functional Partners:
EFL41188.1
Secreted protein.
  
     0.682
EFL38432.1
SMI1/KNR4 family protein.
  
     0.579
EFL41189.1
Glycosyl transferase.
  
     0.572
EFL42346.1
Transposase.
  
     0.570
EFL39064.1
Conserved hypothetical protein.
  
     0.539
EFL42955.1
Conserved hypothetical protein.
  
     0.533
EFL39748.1
Conserved hypothetical protein.
  
     0.518
EFL37265.1
Transposase.
  
     0.516
EFL40306.1
DNA-binding protein.
  
     0.511
EFL37499.1
Conserved hypothetical protein.
  
     0.454
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.