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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39464.1dTMP kinase. (79 aa)    
Predicted Functional Partners:
EFL42917.1
Endo-1,4-beta-xylanase Z.
    
 
 0.948
EFL42915.1
alpha-L-arabinofuranosidase (Arabinosidase).
    
   0.798
EFL39459.1
Conserved hypothetical protein.
 
     0.788
EFL39465.1
Translation initiation factor IF-2.
       0.773
EFL37214.1
Conserved hypothetical protein.
    
   0.724
EFL37311.1
Conserved hypothetical protein.
    
   0.724
EFL37465.1
Integral membrane protein.
    
   0.724
EFL37697.1
Proteinase.
    
   0.724
EFL37866.1
Glycosyl hydrolase.
    
   0.724
EFL38319.1
Subtilisin inhibitor (SSI type); Belongs to the protease inhibitor I16 (SSI) family.
    
   0.724
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.