STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39475.1Antibiotic resistance ATP-binding protein. (347 aa)    
Predicted Functional Partners:
EFL39474.1
ABC transporter, permease component.
 
 
 0.968
EFL41688.1
ABC-transporter, transmembrane component.
 
 
 0.943
EFL40015.1
ABC-2 type transporter.
 
 
 0.874
EFL42192.1
ABC transporter, permease component.
 
 
 0.867
EFL37365.1
Daunorubicin resistance transmembrane protein.
 
 
 0.860
EFL41658.1
Multidrug ABC transporter permease.
  
 
 0.855
EFL40316.1
Daunorubicin resistance transmembrane protein.
 
  
  0.842
EFL39896.1
ABC transporter, permease.
 
 
 0.832
EFL39071.1
ABC transporter, integral membrane subunit.
  
 
  0.809
EFL40190.1
ABC transporter membrane-spanning protein; Truncated CDS.
 
 
 0.685
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.