Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL39484.1NADP-dependent alcohol dehydrogenase. (347 aa)    
Predicted Functional Partners:
EFL43318.1
Alcohol dehydrogenase.
  
  
 
0.872
EFL39508.1
Aldehyde dehydrogenase; Overlaps another CDS with the same product name.
   
  0.866
EFL42204.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
  0.866
EFL42132.1
Pyridoxal phosphate phosphatase.
     
  0.850
EFL42205.1
Alcohol dehydrogenase (zinc-binding).
  
 
 
0.850
EFL43254.1
Alcohol dehydrogenase; Truncated CDS; unextendable partial coding region.
    
  0.830
EFL37431.1
Epoxide hydrolase.
     
  0.828
EFL42472.1
Lysine monooxygenase.
    
  0.828
EFL39586.1
Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
  0.796
EFL40018.1
Benzaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
  0.796
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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