Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFL37442.1 | EFL37443.1 | SSRG_00246 | SSRG_00247 | PAS/PAC sensor hybrid histidine kinase. | PAS/PAC sensor hybrid histidine kinase. | 0.999 |
EFL37442.1 | EFL37667.1 | SSRG_00246 | SSRG_00471 | PAS/PAC sensor hybrid histidine kinase. | Two-component sensor histidine kinase. | 0.993 |
EFL37442.1 | EFL38759.1 | SSRG_00246 | SSRG_01563 | PAS/PAC sensor hybrid histidine kinase. | Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name. | 0.999 |
EFL37442.1 | EFL38760.1 | SSRG_00246 | SSRG_01564 | PAS/PAC sensor hybrid histidine kinase. | Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name. | 0.999 |
EFL37442.1 | EFL39495.1 | SSRG_00246 | SSRG_02299 | PAS/PAC sensor hybrid histidine kinase. | Adenylate cyclase. | 0.955 |
EFL37442.1 | EFL40068.1 | SSRG_00246 | SSRG_02872 | PAS/PAC sensor hybrid histidine kinase. | crp/Fnr family transcriptional regulator. | 0.597 |
EFL37442.1 | EFL40827.1 | SSRG_00246 | SSRG_03631 | PAS/PAC sensor hybrid histidine kinase. | Transcriptional regulator; Truncated CDS. | 0.597 |
EFL37442.1 | EFL42695.1 | SSRG_00246 | SSRG_05499 | PAS/PAC sensor hybrid histidine kinase. | Hypothetical protein. | 0.999 |
EFL37442.1 | cpdA | SSRG_00246 | SSRG_01129 | PAS/PAC sensor hybrid histidine kinase. | Phosphodiesterase; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes. | 0.860 |
EFL37442.1 | ndk | SSRG_00246 | SSRG_04173 | PAS/PAC sensor hybrid histidine kinase. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.837 |
EFL37443.1 | EFL37442.1 | SSRG_00247 | SSRG_00246 | PAS/PAC sensor hybrid histidine kinase. | PAS/PAC sensor hybrid histidine kinase. | 0.999 |
EFL37443.1 | EFL37667.1 | SSRG_00247 | SSRG_00471 | PAS/PAC sensor hybrid histidine kinase. | Two-component sensor histidine kinase. | 0.993 |
EFL37443.1 | EFL38759.1 | SSRG_00247 | SSRG_01563 | PAS/PAC sensor hybrid histidine kinase. | Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name. | 0.999 |
EFL37443.1 | EFL38760.1 | SSRG_00247 | SSRG_01564 | PAS/PAC sensor hybrid histidine kinase. | Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name. | 0.999 |
EFL37443.1 | EFL39495.1 | SSRG_00247 | SSRG_02299 | PAS/PAC sensor hybrid histidine kinase. | Adenylate cyclase. | 0.955 |
EFL37443.1 | EFL40068.1 | SSRG_00247 | SSRG_02872 | PAS/PAC sensor hybrid histidine kinase. | crp/Fnr family transcriptional regulator. | 0.597 |
EFL37443.1 | EFL40827.1 | SSRG_00247 | SSRG_03631 | PAS/PAC sensor hybrid histidine kinase. | Transcriptional regulator; Truncated CDS. | 0.597 |
EFL37443.1 | EFL42695.1 | SSRG_00247 | SSRG_05499 | PAS/PAC sensor hybrid histidine kinase. | Hypothetical protein. | 0.999 |
EFL37443.1 | cpdA | SSRG_00247 | SSRG_01129 | PAS/PAC sensor hybrid histidine kinase. | Phosphodiesterase; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes. | 0.857 |
EFL37443.1 | ndk | SSRG_00247 | SSRG_04173 | PAS/PAC sensor hybrid histidine kinase. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.837 |
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