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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39501.1Regulatory protein, DeoR. (261 aa)    
Predicted Functional Partners:
EFL38675.1
GNAT family acetyltransferase.
    
   0.809
EFL38676.1
GNAT family acetyltransferase.
    
   0.809
EFL40863.1
PTS system, fructose-specific family, IIABC component.
 
  
 0.808
EFL40862.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.801
EFL42805.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.801
EFL40689.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.799
EFL39502.1
Dihydrolipoyl dehydrogenase.
       0.750
EFL39503.1
Conserved hypothetical protein.
       0.705
EFL39504.1
Purine nucleotide phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
       0.671
EFL39505.1
Phosphomannomutase.
       0.521
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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