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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39542.1Conserved hypothetical protein. (734 aa)    
Predicted Functional Partners:
EFL39541.1
Conserved hypothetical protein; Truncated CDS; unextendable partial coding region.
       0.870
EFL39537.1
Transferase.
 
     0.793
EFL38475.1
Serine/threonine protein phosphatase.
   
   0.780
EFL38968.1
ATP/GTP binding protein.
   
   0.780
EFL42955.1
Conserved hypothetical protein.
   
   0.780
EFL42076.1
Magnesium chelatase.
  
 0.735
EFL39543.1
Transferase.
 
  
 0.702
EFL39544.1
Conserved hypothetical protein.
 
     0.699
EFL39824.1
Integral membrane transferase.
    
 0.670
EFL39825.1
Glycosyl transferase, group 2.
    
 0.670
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.