STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39543.1Transferase. (321 aa)    
Predicted Functional Partners:
EFL39544.1
Conserved hypothetical protein.
 
     0.949
EFL39540.1
Conserved hypothetical protein.
 
     0.858
EFL39538.1
Conserved hypothetical protein.
 
   
 0.849
EFL39537.1
Transferase.
 
   
 0.847
EFL39536.1
Sialic acid synthase.
 
  
 0.782
EFL39535.1
Conserved hypothetical protein.
 
     0.725
EFL39542.1
Conserved hypothetical protein.
 
  
 0.704
EFL39541.1
Conserved hypothetical protein; Truncated CDS; unextendable partial coding region.
       0.592
EFL40250.1
Glycosyl transferase, family 2; Unextendable partial coding region.
  
  
  0.591
EFL41298.1
Transferase.
 
  
 0.589
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.